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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942403.1_cds_XP_016485872.1_76762
CDS Infomation

[gene=LOC107806265] [db_xref=GeneID:107806265] [protein=sodium/hydrogen exchanger 2-like] [protein_id=XP_016485872.1] [location=join(44735..44911,45031..45149,45904..46001,46115..46174,46269..46315,46398..46592,46683..46729,48956..49022,49122..49222,49312..49413,49523..49661,50033..50095,50209..50292,50440..50751)] [gbkey=CDS]
Sequence

ATGGCGGCGTTTGACATCGGGGCGCTGCTGGAAAAGATGAAGATGCTATGGACCTCAGAT
CACGCGTCCGTGGTGTCAATAAACTTATTTATTGCACTTATCTGCGCGTGTATCGTGATT
GGTCATCTATTGGAGGAGAACCGCTGGATGAATGAGTCGATAACTGCTCTTTTGATTGGC
TTGTGCACGGGAGCTTTGATTCTACTAATAAGTGGAGGGAAGAGTTCGCATGTTTTCATG
TTCAGCGCAGATCTTTTCTTTATTTATCTTCTTCCACCAATCATTTTTAATGCCGGGTTC
CAGGTGAAAAAGAAGCAATTCTTCCGCAATTTCATGACTATCATACTTTTTGGGGCACTA
GGTACCCTGATATCTTTTGTTATCATATCATTAGGTGCTATTGGAATTTTCAGGAAAATT
AATATTGGGAAACTTGAAATTGGAGATTACCTTGCAATTGGAGCAATCTTCTCTGCAACA
GATTCTGTTTGCACCTTACAAGTGCTTAATCAGGATGAAACGCCGTTATTGTACAGTTTA
GTCTTTGGGGAAGGTGTTTTAAATGATGCTACATCTGTAGTTTTATTCAATGCTGTCCAG
AACTTTGACTTGTCTCATATCAACACTAGCATTGCCCTGCAATTACTTGGAAACTTTCTA
TACTTATTTATCTCAAGCACCTTCCTGGGGTTTGTTGCAGGTCTATTGAGTGCCTATATT
ATTAAGAAGCTCTGCTTTGGAAGGCACTCCACAGATCGTGAAGTTTCTATAATGATACTC
ATGGCGTACCTATCTTACATGCTTGCTGAATTGTTCAGTTTAAGTGCAATTCTCACAGTG
TTCTTTTGCGGGATTGTGATGTCCCACTACACCTGGTATAACGTGACTGAGAACTCAAGA
TGCACCACCAAGCACACCTTTGCTACGCTATCGTTTATTGCTGAAATTTTCATATTCCTC
TATGTTGGTATGGATGCTTTGGACATTGAAAAGTGGAGATTTGTTAGCGACAGCCCTGGA
ATATCAGTTGAGGTTAGCTCAATACTATTGGGACTTGTCTTGGTTGGAAGGGCAGCCTTT
GTTTTCCCCTTATCATTTCTGTCCAACTTGACCAAGAAGTCTCCACATGAGAAGACTGAC
TTCAAGCAGCAGGTCACAATATGGTGGGCTGGCCTTATGCGAGGTGCCGTTTCTATGGCC
CTTGCTTATAATCAGTTTACTAAAGAAGGTCATACTCAGTTGCGTGGCAATGCAATAATG
ATCACAAGTACTATCACAGTTGTCCTATTCAGCACAGTGGTATTTGGTTTGATGACAAAA
CCACTGATTAGGCTATTGCTACCCTCACCAGGGACTCCAAAATCTTTCATTAATGTGCCG
CTTTTAGGCAATGGACAAGACTCGGAAGCTGATTTGGGAGCCCACAATTTTCCCCGTCCC
AACAGTTTGCGGATGTTCCTAAGTACCCCTTCTTACACAGTGCACTATTACTGGAGAAAA
TTCGACAATGCATTCATGCGTCCTGTTTTCGGGGGACGAGGTTTTGTACCTTATGTTCCT
GGATCACCCACCGAAGGAAGTGAACCAACAATGGCATTGATGGAAAGCTAG

Peptide Sequence

PEP ID

XP_016485872.1
PEP Infomation

PREDICTED: sodium/hydrogen exchanger 2-like [Nicotiana tabacum]
Sequence

MAAFDIGALLEKMKMLWTSDHASVVSINLFIALICACIVIGHLLEENRWMNESITALLIG
LCTGALILLISGGKSSHVFMFSADLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIILFGAL
GTLISFVIISLGAIGIFRKINIGKLEIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSL
VFGEGVLNDATSVVLFNAVQNFDLSHINTSIALQLLGNFLYLFISSTFLGFVAGLLSAYI
IKKLCFGRHSTDREVSIMILMAYLSYMLAELFSLSAILTVFFCGIVMSHYTWYNVTENSR
CTTKHTFATLSFIAEIFIFLYVGMDALDIEKWRFVSDSPGISVEVSSILLGLVLVGRAAF
VFPLSFLSNLTKKSPHEKTDFKQQVTIWWAGLMRGAVSMALAYNQFTKEGHTQLRGNAIM
ITSTITVVLFSTVVFGLMTKPLIRLLLPSPGTPKSFINVPLLGNGQDSEADLGAHNFPRP
NSLRMFLSTPSYTVHYYWRKFDNAFMRPVFGGRGFVPYVPGSPTEGSEPTMALMES

Transcript Sequence

Gene sequence data has not been registered.